General Information

  • ID:  hor002733
  • Uniprot ID:  B5UA18
  • Protein name:  Ci-VP
  • Gene name:  Ci-VP
  • Organism:  Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis)
  • Family:  NA
  • Source:  animal
  • Expression:  NA
  • Disease:  NA
  • Comments:  NA
  • Taxonomy:  Ciona (genus), Cionidae (family), Phlebobranchia (order), Ascidiacea (class), Tunicata (subphylum), Chordata (phylum), Deuterostomia, Bilateria, Eumetazoa, Metazoa (kingdom), Opisthokonta, Eukaryota (superkingdom), cellular organisms
  • GO MF:  NA
  • GO BP:  NA
  • GO CC:  NA

Sequence Information

  • Sequence:  CFFRDCSNMDWYR
  • Length:  13(21-33)
  • Propeptide:  MYRQFSIVLILLANSIILDACFFRDCSNMDWYRKRGQEITDPRKQLFQELPEFLDNRPFQCNKDESNTGNECKFSGQKICCQETDDGQVICAVSATELQHRFLSSGVLQQVQRILHEFVEISSRGAPQKRRYCIKVGVCCSWDRCRPQVSCSYKDQDIPSHKEVFQDQTALVNRISHLLQDMY
  • Signal peptide:  MYRQFSIVLILLANSIILDA
  • Modification:  NA
  • Glycosylation:  NA
  • Mutagenesis:  NA

Activity

  • Function:  NA
  • Mechanism:  NA
  • Cross BBB:  NA
  • Target:  NA
  • Target Unid:  NA
  • IC50: NA
  • EC50: NA
  • ED50: NA
  • kd: NA
  • Half life: NA

Structure

  • Disulfide bond:  NA
  • Structure ID:  AF-B5UA18-F1(AlphaFold_DB_ID)
  • Structure: (PDB_ID-from https://www.rcsb.org/; AlphaFold_DB_ID-from https://alphafold.ebi.ac.uk/; hordbxxxxxx_AF2.pdb was predicted structure by AlphaFold2; hordbxxxxxx_ESM.pdb was predicted structure by ESMFold)
  •    hor002733_AF2.pdbhor002733_ESM.pdb

Physical Information

Mass: 195718 Formula: C76H103N21O21S3
Absent amino acids: AEGHIKLPQTV Common amino acids: CDFR
pI: 6.17 Basic residues: 2
Polar residues: 5 Hydrophobic residues: 3
Hydrophobicity: -76.92 Boman Index: -4426
Half-Life: 1.2 hour Half-Life Yeast: >20 hour
Half-Life E.Coli: >10 hour Aliphatic Index 0
Instability Index: -377.69 Extinction Coefficient cystines: 7115
Absorbance 280nm: 592.92

Literature

  • PubMed ID:  21467196
  • Title:  Peptidomic Analysis of the Central Nervous System of the Protochordate, Ciona Intestinalis: Homologs and Prototypes of Vertebrate Peptides and Novel Peptides